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Alchemical free energy calculations typically rely on intermediate states to bridge between the relevant phase spaces of the two end states. These intermediate states are usually created by mixing the energies or parameters of the end states according to a coupling parameter λ. The choice of the procedure has a strong impact on the efficiency of the calculation, as it affects both the encountered energy barriers and the phase space overlap between the states. The present work builds on the connection between the minimum variance pathway (MVP) and enveloping distribution sampling (EDS). It is shown that both methods can be regarded as special cases of a common scheme referred to as λ-EDS, which can also reproduce the behavior of conventional λ-intermediate states. A particularly attractive feature of λ-EDS is its ability to emulate the use of soft core potentials (SCP) while avoiding the associated computational overhead when applying efficient free energy estimators such as the multistate Bennett's acceptance ratio (MBAR). The method is illustrated for both relative and absolute free energy calculations considering five benchmark systems. The first two systems (charge inversion and cavity creation in a dipolar solvent) demonstrate the use of λ-EDS as an alternative coupling scheme in the context of thermodynamic integration (TI). The three other systems (change of bond length, change of dihedral angles, and cavity creation in water) investigate the efficiency and optimal choice of parameters in the context of free energy perturbation (FEP) and Bennett's acceptance ratio (BAR). It is shown that λ-EDS allows larger steps along the alchemical pathway than conventional intermediate states.The ability to track interfacial dynamics of a single nanoparticle at the solution-solid interface is crucial for understanding physical, chemical, and biological processes, but it remains a challenge. Here, we demonstrated a plasmonic imaging technique that can track unlabeled nanoparticles at the solution-solid interface with high spatial and temporal resolutions. This technique is based on particle-induced interferometric scattering of a surface plasmonic wave, which results in a high vertical sensitivity. Using this ability, we tracked the trajectories of a single nanoparticle interacting with a surface, measured the hydrodynamically hindered diffusion of nanoparticles, and revealed the surface chemistry-dependent behavior of nanoparticles at the interface. The application for tracking formation of membranes from a lipid vesicle was demonstrated, indicating the potential for investigating a broad range of nano-objects at interfaces in a complex environment.Failure of a material is an irreversible process since the material loses its original characteristics and properties. The catastrophic brittle failure under tensile stress of nanoporous gold (np-Au) with a bicontinuous open-cell structure makes impossible otherwise attractive applications. Here, we first demonstrate a self-healing process in tensile-fractured np-Au to overcome the limit of fragility via mechanically assisted cold-welding under ambient conditions. The self-healing ability of np-Au in terms of mechanical properties shows strength recovery up to 64.4% and fully recovered elastic modulus compared with initial tensile properties. Topological parameters obtained by three-dimensional reconstruction of self-healed np-Au clarify the strength, elastic modulus, and strain distribution. The self-healing process in np-Au is attributed to surface diffusion expedited by local compressive stress in the ultrasmall dimension of ligaments formed by ductile failures of individual ligaments.A novel and selective synthesis of 2-indolyl-3-oxoindolines or 2-(2-aminophenyl)quinolines through tunable dimerizations of 2-alkynylanilines is presented. Mechanistically, the formation of 2-indolyl-3-oxoindolines involves a Cu(OAc)2/O2-promoted intramolecular cyclization of 2-alkynylaniline to give the required indole and 3H-indol-3-one intermediates followed by the indolylation of 3H-indol-3-one. On the other hand, the formation of 2-(2-aminophenyl)quinolines is believed to go through a Bi(OTf)3/MesCO2H-catalyzed intermolecular N-nucleophilic addition between two 2-alkynylaniline molecules to give an enamine intermediate followed by its intramolecular C-nucleophilic addition/annulation. https://www.selleckchem.com/products/2-nbdg.html Notable features of these new methods include easily obtainable substrates, economical catalysts and oxidant, controllable selectivity, and high versatility toward diverse products.We explore the range of applicability of the nuclear ensemble method (NEM) for quantitative simulations of absorption spectra and their temperature variations. We formulate a "good practice" for the NEM based on statistical theory. Special attention is paid to proper treatment of uncertainty estimation including the convergence with the number of samples, which is often neglected in the field. As a testbed, we have selected a well-known chromophore, (E)-azobenzene. We measured its temperature difference UV-vis absorption spectra in methanol, which displayed two dominant features a moderate increase in the intensity of the nπ* band and a pronounced decrease in intensity of the low-energy part of the ππ* band. We attributed both features to increasing non-Condon effects with temperature. We show that the NEM based on the path integral molecular dynamics combined with range-separated hybrid functionals provides quantitatively accurate spectra and their differences. Experimentally, the depletion of the absorption in the ππ* band showed a characteristic vibrational progression that cannot be reproduced with the NEM. We show that hundreds of thousands of samples are necessary to achieve an accuracy sufficient for the unambiguous explanation of the observed temperature effects. We provide a detailed analysis of the temperature effects on the spectrum based on the harmonic model of the system combined with the NEM. We also rationalize the vibrational structure of the spectrum using the Franck-Condon principle.Single-atom catalysts (SACs) have quickly emerged as a new class of catalytic materials. When confronted with classical carbon-supported nanoparticulated catalysts (Pt/C), SACs are often claimed to have superior electrocatalytic properties, e.g., stability. In this study, we critically assess this statement by investigating S-doped carbon-supported Pt SACs as a representative example of noble-metal-based SACs. We use a set of complementary techniques, which includes online inductively coupled plasma mass spectrometry (online ICP-MS), identical location transmission electron microscopy (IL-TEM), and X-ray photoelectron spectroscopy (XPS). It is shown by online ICP-MS that the dissolution behavior of as-synthesized Pt SACs is significantly different from that of metallic Pt/C. Moreover, Pt SACs are, indeed, confirmed to be more stable toward Pt dissolution. When cycled to potentials of up to 1.5 VRHE, however, the dissolution profiles of Pt SACs and Pt/C become similar. IL-TEM and XPS show that this transition is due to morphological and chemical changes caused by cycling.
